Index of /download/sequence/C_dubliniensis_CD36/current

Icon  Name                                                                            Last modified      Size  Description
[PARENTDIR] Parent Directory                                                                                     -   
[   ] C_dubliniensis_CD36_current_chromosomes.fasta.gz                                2024-07-14 07:05  4.2M  
[   ] C_dubliniensis_CD36_version_s01-m04-r05_chromosomes.fasta.gz                    2024-07-14 07:05  4.2M  
[   ] C_dubliniensis_CD36_current_not_feature.fasta.gz                                2024-07-14 07:05  1.7M  
[   ] C_dubliniensis_CD36_version_s01-m04-r05_not_feature.fasta.gz                    2024-07-14 07:05  1.7M  
[   ] C_dubliniensis_CD36_current_orf_genomic.fasta.gz                                2024-07-14 07:05  3.2M  
[   ] C_dubliniensis_CD36_current_orf_plus_intergenic.fasta.gz                        2024-07-14 07:05  6.7M  
[   ] C_dubliniensis_CD36_version_s01-m04-r05_orf_genomic.fasta.gz                    2024-07-14 07:05  3.2M  
[   ] C_dubliniensis_CD36_version_s01-m04-r05_orf_plus_intergenic.fasta.gz            2024-07-14 07:05  6.7M  
[   ] C_dubliniensis_CD36_current_other_features_genomic_1000.fasta.gz                2024-07-14 07:05  143K  
[   ] C_dubliniensis_CD36_current_other_features_no_introns.fasta.gz                  2024-07-14 07:05   50K  
[   ] C_dubliniensis_CD36_current_other_features_plus_intergenic.fasta.gz             2024-07-14 07:05  149K  
[   ] C_dubliniensis_CD36_version_s01-m04-r05_other_features_genomic_1000.fasta.gz    2024-07-14 07:05  143K  
[   ] C_dubliniensis_CD36_version_s01-m04-r05_other_features_no_introns.fasta.gz      2024-07-14 07:05   50K  
[   ] C_dubliniensis_CD36_version_s01-m04-r05_other_features_plus_intergenic.fasta.gz 2024-07-14 07:05  149K  
[   ] C_dubliniensis_CD36_current_orf_coding.fasta.gz                                 2024-07-14 07:05  3.2M  
[   ] C_dubliniensis_CD36_current_orf_genomic_1000.fasta.gz                           2024-07-14 07:05  6.8M  
[   ] C_dubliniensis_CD36_current_orf_trans_all.fasta.gz                              2024-07-14 07:05  2.2M  
[   ] C_dubliniensis_CD36_current_other_features_genomic.fasta.gz                     2024-07-14 07:05   51K  
[   ] C_dubliniensis_CD36_version_s01-m04-r05_orf_coding.fasta.gz                     2024-07-14 07:05  3.2M  
[   ] C_dubliniensis_CD36_version_s01-m04-r05_orf_genomic_1000.fasta.gz               2024-07-14 07:05  6.8M  
[   ] C_dubliniensis_CD36_version_s01-m04-r05_orf_trans_all.fasta.gz                  2024-07-14 07:05  2.2M  
[   ] C_dubliniensis_CD36_version_s01-m04-r05_other_features_genomic.fasta.gz         2024-07-14 07:05   51K  
[DIR] EMBL_format/                                                                    2024-12-02 02:38    -   

This directory contains the current version of Candida dubliniensis CD36
genomic sequences.

C. dubliniensis CD36 was sequenced by the Wellcome Trust Sanger Institute (Jackson et al., 2009,
Genome Res. 19:2231-2244). Sequence and annotation obtained by CGD from EBI.

Last updated on  2010-07-02

* Chromosomal sequence:
                C_dubliniensis_CD36_chromosomes.fasta.gz

* Sequence with no introns for all ORFs:
                C_dubliniensis_CD36_orf_coding.fasta.gz

* Sequence with introns for all ORFs:
                C_dubliniensis_CD36_orf_genomic.fasta.gz

* Sequence with introns and untranslated region 1000 bp upstream and
downstream for all ORFs:
                C_dubliniensis_CD36_orf_genomic_1000.fasta.gz

* Translation of all ORFs:
                C_dubliniensis_CD36_orf_trans_all.fasta.gz

* Sequence of other genomic features, including introns (if any):
                C_dubliniensis_CD36_other_features_genomic.fasta.gz
Note: Currently for Candida dubliniensis CD36, these feature types are included in this file:
                repeat_region
                tRNA

* Sequence of the above genomic features, with introns (if any) removed:
                C_dubliniensis_CD36_other_features_no_introns.fasta.gz

* Sequence of the above genomic features, plus region 1000 bp upstream and downstream:
                C_dubliniensis_CD36_other_features_genomic_1000.fasta.gz

* Sequence between annotated chromosomal features:
                C_dubliniensis_CD36_not_features.fasta.gz
Note: Features excluded from this file include:
                Protein Coding Sequence
                repeat_region
                tRNA

The files in this directory are in FASTA format.

All files are gzip compressed. There are several freely available
software options for decompressing gzipped files.  The software 
and other useful information is available on these web sites:
- WinZip (http://www.winzip.com/)
- Stuffit (http://www.stuffit.com/)
- Gzip (http://www.gzip.org/

and the gzip user's manual:
http://www.math.utah.edu/docs/info/gzip_toc.html

Additional sequence documentation is found on the CGD web site at:
http://www.candidagenome.org/help/SequenceHelp.shtml

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