UniqueID (Johnson lab)	orf6#	orf19 #	Name (Candida Annotation Working Group)	Annotation (Candida Annotation Working Group)	Gene class(es)	rfg1/WT #1 	rfg1/WT #2	rfg1/WT #3	rfg1/WT #4
F52F11	2072	111	CAN1	arginine permease	Amino acid biosynthesis/metabolism/transport	0.17	0.38	0.28	0.35
F17E9	1217	1353		hypothetical protein		0.05	0.06	0.12	0.23
F4F6	331	1356		thiosulfate sulfurtransferase	Miscellaneous 	0.27	0.2		0.09
F20E9	3138	1653		conserved hypothetical protein		0.15	0.25	0.42	0.22
J43H8	3618	1674	CDC53	ubiquitin ligase (cullin) of SCF involved in cell cycle control	Cell cycle | General metabolism	0.42	0.4	0.44	0.34
F27G8	3121	1706	MET18	TFIIH regulator	DNA metabolism/repair | Transcription factors/chromatin/DNA-binding | Amino acid biosynthesis/metabolism/transport | Stress response | General metabolism	0.44	0.41	0.43	0.29
F16C8	4844	1716	URA3	orotidine-5'-phosphate decarboxylase	General metabolism	0.16	0.34	0.3	0.43
F60B10	1167	1809	FOX2	"peroxisomal trifunctional hydratase-dehydrogenase-epimerase, beta-oxidation protein"	Lipid metabolism | Oxidoreductases | General metabolism	0.26	0.39		0.21
J5C6	7023	1897		conserved hypothetical protein	DNA metabolism/repair | Transcription factors/chromatin/DNA-binding | General metabolism	0.43	0.43	0.42	0.6
J29E6	5039	1964		conserved hypothetical protein		0.47	0.32	0.36	0.27
F42B3	5987	2048		hypothetical protein		0.09	0.36	0.11	0.35
J47H12	3428	2192	GDH2	NAD-specific glutamate dehydrogenase	Oxidoreductases | General metabolism	0.14	0.21	0.3	
J30D9	4960	2475		hypothetical protein		0.09	0.07	0.16	
F62F2	3818	2645		hypothetical protein			0.26		0.16
F57F9	1464	2659		conserved hypothetical protein	Unknown process and function	0.01	0.06	0.12	0.24
J29C5	3276	2854				0.46	0.43	0.41	0.36
F58D10	5925	31	CIS35	potential cell wall protein | member of a group of C.albicans orfs that are weakly similar to Sc CIS3/PIR3/PIR1 	Secreted/degradative enzymes | ER/Golgi/secretion | Cell wall components			0.5	0.19
F55G5	2344	3895	CHT2	chitinase 2 precursor	ER/Golgi/secretion | Secreted/degradative enzymes | Cell wall components | Sugar/polysacchride metabolism	0.18	0.11	0.35	0.15
F37E1	5200	4286		hypothetical protein		0.27	0.35	0.44	0.32
J12D1	3170	4318	MIG1	transcriptional regulator 	Transcription factors/chromatin/DNA-binding | Sugar/polysacchride metabolism | General metabolism	0.37	0.28	0.5	0.33
F7G12	3263	4323		conserved hypothetical protein				0.38	0.13
M15D8	7251	4438	RME1	zinc-finger transcription factor		0.17	0.09	0.11	
F63H3	1752	4699		conserved hypothetical membrane protein	Lipid metabolism | Secreted/degradative enzymes | General metabolism	0.36		0.29	0.39
F21A2	2657	4959		hypothetical protein	Transcription factors/chromatin/DNA-binding | General metabolism	0.33	0.39	0.43	0.29
M4F1	3149	4979	KNS1	ser/thr protein kinase	Signaling/kinases/phosphatases | General metabolism	0.46	0.52	0.52	0.35
J5E11	3407	5124	HYR11	hyphally regulated protein	Cell motility/budding/cell division | Cell wall components	0.49	0.47	0.42	0.52
F42D2	7694	5248		conserved hypothetical protein		0.39	0.45	0.58	0.5
J35D6	8294	5305	RHD3	conserved protein reressed in hyphal development		0.14	0.28	0.17	0.4
F14C3	1361	5572	VAN2	mannosyltransferase: vanadate resistance protein		0.44	0.45	0.37	0.6
F51A2	4720	570	HYR9	similar to HYR1	Cell motility/budding/cell division | Cell wall components	0.34	0.28	0.39	0.21
F20E4	4857	5785		hypothetical protein		0.2			0.14
F21A6	1073	6488		conserved hypothetical protein	Miscellaneous 	0.21	0.24	0.29	0.18
F24C12	7657	6503		conserved hypothetical protein		0.35	0.19		0.14
F65F11	7632	6528		conserved hypothetical protein		0.41	0.43	0.54	0.4
F14A7	8400	7319	SUC1	zinc finger protein Suc1	Transcription factors/chromatin/DNA-binding | General metabolism	0.48		0.38	0.36
J12D2	8934	7586	CHT3	chitinase 3 precursor	ER/Golgi/secretion | Secreted/degradative enzymes | Cell wall components | Sugar/polysacchride metabolism	0.27	0.21	0.53	0.21
F47E2	8200	951		hypothetical protein		0.19	0.22	0.21	0.26


SAM False Discovery Rate (FDR) = 0.90 %