# description: C_albicans_SC5314_version_A22-s07-m01-r27 gtf with potential novel genes only # format: gtf # created: 17 July, 2020 # source: Global Translational Landscape of the Candida albicans Morphological Transition - Vasanthakrisha Mundodi*, Saket Choudhary*, Andrew D. Smith and David Kadosh (MSCK_2020) Ca22chr1A_C_albicans_SC5314 MSCK_2020 exon 1283 1555 . - 0 "transcript_id ""MSTRG.1.1""; gene_id ""MSTRG.1""; gene_name ""MSTRG.1""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr1A_C_albicans_SC5314 MSCK_2020 exon 1633 2551 . + 0 "transcript_id ""MSTRG.2.1""; gene_id ""MSTRG.2""; gene_name ""MSTRG.2""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr1A_C_albicans_SC5314 MSCK_2020 exon 4731 5343 . - 0 "transcript_id ""MSTRG.6.1""; gene_id ""MSTRG.6""; gene_name ""MSTRG.6""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr1A_C_albicans_SC5314 MSCK_2020 exon 404412 404945 . + 0 "transcript_id ""MSTRG.182.1""; gene_id ""MSTRG.182""; gene_name ""MSTRG.182""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr1A_C_albicans_SC5314 MSCK_2020 exon 1096229 1096572 . + 0 "transcript_id ""MSTRG.476.1""; gene_id ""MSTRG.476""; gene_name ""MSTRG.476""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr1A_C_albicans_SC5314 MSCK_2020 exon 1158413 1158649 . - 0 "transcript_id ""MSTRG.509.1""; gene_id ""MSTRG.509""; gene_name ""MSTRG.509""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr1A_C_albicans_SC5314 MSCK_2020 exon 1249735 1250141 . + 0 "transcript_id ""MSTRG.553.1""; gene_id ""MSTRG.553""; gene_name ""MSTRG.553""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr1A_C_albicans_SC5314 MSCK_2020 exon 1966853 1966976 . - 0 "transcript_id ""MSTRG.835.1""; gene_id ""MSTRG.835""; gene_name ""MSTRG.835""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr1A_C_albicans_SC5314 MSCK_2020 exon 1967256 1967341 . - 0 "transcript_id ""MSTRG.835.1""; gene_id ""MSTRG.835""; gene_name ""MSTRG.835""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr1A_C_albicans_SC5314 MSCK_2020 exon 2252561 2252846 . - 0 "transcript_id ""MSTRG.944.1""; gene_id ""MSTRG.944""; gene_name ""MSTRG.944""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr1B_C_albicans_SC5314 MSCK_2020 exon 512144 512376 . - 0 "transcript_id ""MSTRG.1494.1""; gene_id ""MSTRG.1494""; gene_name ""MSTRG.1494""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr1B_C_albicans_SC5314 MSCK_2020 exon 1318641 1318855 . - 0 "transcript_id ""MSTRG.1841.1""; gene_id ""MSTRG.1841""; gene_name ""MSTRG.1841""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr1B_C_albicans_SC5314 MSCK_2020 exon 1673384 1673583 . + 0 "transcript_id ""MSTRG.1980.1""; gene_id ""MSTRG.1980""; gene_name ""MSTRG.1980""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr1B_C_albicans_SC5314 MSCK_2020 exon 2326419 2326823 . - 0 "transcript_id ""MSTRG.2209.1""; gene_id ""MSTRG.2209""; gene_name ""MSTRG.2209""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr2A_C_albicans_SC5314 MSCK_2020 exon 1 268 . + 0 "transcript_id ""MSTRG.2510.1""; gene_id ""MSTRG.2510""; gene_name ""MSTRG.2510""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr2A_C_albicans_SC5314 MSCK_2020 exon 84 812 . - 0 "transcript_id ""MSTRG.2511.1""; gene_id ""MSTRG.2511""; gene_name ""MSTRG.2511""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr2A_C_albicans_SC5314 MSCK_2020 exon 450787 451013 . + 0 "transcript_id ""MSTRG.2713.1""; gene_id ""MSTRG.2713""; gene_name ""MSTRG.2713""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr2A_C_albicans_SC5314 MSCK_2020 exon 1497885 1498263 . - 0 "transcript_id ""MSTRG.3162.1""; gene_id ""MSTRG.3162""; gene_name ""MSTRG.3162""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr2A_C_albicans_SC5314 MSCK_2020 exon 1886000 1886389 . - 0 "transcript_id ""MSTRG.3336.1""; gene_id ""MSTRG.3336""; gene_name ""MSTRG.3336""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr2A_C_albicans_SC5314 MSCK_2020 exon 1886495 1886520 . - 0 "transcript_id ""MSTRG.3336.1""; gene_id ""MSTRG.3336""; gene_name ""MSTRG.3336""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr2A_C_albicans_SC5314 MSCK_2020 exon 1886620 1886844 . - 0 "transcript_id ""MSTRG.3336.1""; gene_id ""MSTRG.3336""; gene_name ""MSTRG.3336""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr2A_C_albicans_SC5314 MSCK_2020 exon 1914958 1915175 . - 0 "transcript_id ""MSTRG.3355.1""; gene_id ""MSTRG.3355""; gene_name ""MSTRG.3355""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr2A_C_albicans_SC5314 MSCK_2020 exon 2229206 2229767 . - 0 "transcript_id ""MSTRG.3486.1""; gene_id ""MSTRG.3486""; gene_name ""MSTRG.3486""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr2A_C_albicans_SC5314 MSCK_2020 exon 2231578 2231838 . + 0 "transcript_id ""MSTRG.3487.1""; gene_id ""MSTRG.3487""; gene_name ""MSTRG.3487""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr2B_C_albicans_SC5314 MSCK_2020 exon 2063577 2063814 . - 0 "transcript_id ""MSTRG.4003.1""; gene_id ""MSTRG.4003""; gene_name ""MSTRG.4003""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr3A_C_albicans_SC5314 MSCK_2020 exon 2169 3818 . + 0 "transcript_id ""MSTRG.4032.1""; gene_id ""MSTRG.4032""; gene_name ""MSTRG.4032""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr3A_C_albicans_SC5314 MSCK_2020 exon 1479997 1480373 . - 0 "transcript_id ""MSTRG.4628.1""; gene_id ""MSTRG.4628""; gene_name ""MSTRG.4628""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr3A_C_albicans_SC5314 MSCK_2020 exon 1796512 1797224 . - 0 "transcript_id ""MSTRG.4768.1""; gene_id ""MSTRG.4768""; gene_name ""MSTRG.4768""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr4A_C_albicans_SC5314 MSCK_2020 exon 83606 83932 . - 0 "transcript_id ""MSTRG.5225.1""; gene_id ""MSTRG.5225""; gene_name ""MSTRG.5225""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr4A_C_albicans_SC5314 MSCK_2020 exon 781552 781959 . + 0 "transcript_id ""MSTRG.5506.1""; gene_id ""MSTRG.5506""; gene_name ""MSTRG.5506""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr4A_C_albicans_SC5314 MSCK_2020 exon 1247955 1248179 . - 0 "transcript_id ""MSTRG.5693.1""; gene_id ""MSTRG.5693""; gene_name ""MSTRG.5693""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr4A_C_albicans_SC5314 MSCK_2020 exon 1602252 1602648 . + 0 "transcript_id ""MSTRG.5848.1""; gene_id ""MSTRG.5848""; gene_name ""MSTRG.5848""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr4B_C_albicans_SC5314 MSCK_2020 exon 1456627 1456869 . + 0 "transcript_id ""MSTRG.6460.1""; gene_id ""MSTRG.6460""; gene_name ""MSTRG.6460""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr5A_C_albicans_SC5314 MSCK_2020 exon 256334 256550 . - 0 "transcript_id ""MSTRG.6630.1""; gene_id ""MSTRG.6630""; gene_name ""MSTRG.6630""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr5A_C_albicans_SC5314 MSCK_2020 exon 1118061 1118380 . + 0 "transcript_id ""MSTRG.6996.1""; gene_id ""MSTRG.6996""; gene_name ""MSTRG.6996""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr5A_C_albicans_SC5314 MSCK_2020 exon 1180953 1181075 . + 0 "transcript_id ""MSTRG.7036.2""; gene_id ""MSTRG.7036""; gene_name ""MSTRG.7036""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr5A_C_albicans_SC5314 MSCK_2020 exon 1181256 1181617 . + 0 "transcript_id ""MSTRG.7036.2""; gene_id ""MSTRG.7036""; gene_name ""MSTRG.7036""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr5A_C_albicans_SC5314 MSCK_2020 exon 1180959 1181075 . + 0 "transcript_id ""MSTRG.7036.3""; gene_id ""MSTRG.7036""; gene_name ""MSTRG.7036""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr5A_C_albicans_SC5314 MSCK_2020 exon 1181267 1181585 . + 0 "transcript_id ""MSTRG.7036.3""; gene_id ""MSTRG.7036""; gene_name ""MSTRG.7036""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr6A_C_albicans_SC5314 MSCK_2020 exon 223430 223447 . + 0 "transcript_id ""MSTRG.7517.1""; gene_id ""MSTRG.7517""; gene_name ""MSTRG.7517""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr6A_C_albicans_SC5314 MSCK_2020 exon 223618 223961 . + 0 "transcript_id ""MSTRG.7517.1""; gene_id ""MSTRG.7517""; gene_name ""MSTRG.7517""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr6A_C_albicans_SC5314 MSCK_2020 exon 435469 435784 . - 0 "transcript_id ""MSTRG.7608.1""; gene_id ""MSTRG.7608""; gene_name ""MSTRG.7608""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr6A_C_albicans_SC5314 MSCK_2020 exon 1031751 1032015 . - 0 "transcript_id ""MSTRG.7847.1""; gene_id ""MSTRG.7847""; gene_name ""MSTRG.7847""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr6B_C_albicans_SC5314 MSCK_2020 exon 156912 157205 . + 0 "transcript_id ""MSTRG.7906.1""; gene_id ""MSTRG.7906""; gene_name ""MSTRG.7906""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr6B_C_albicans_SC5314 MSCK_2020 exon 217117 217350 . - 0 "transcript_id ""MSTRG.7936.1""; gene_id ""MSTRG.7936""; gene_name ""MSTRG.7936""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr7A_C_albicans_SC5314 MSCK_2020 exon 110720 111447 . - 0 "transcript_id ""MSTRG.8245.6""; gene_id ""MSTRG.8245""; gene_name ""MSTRG.8245""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr7A_C_albicans_SC5314 MSCK_2020 exon 111537 111610 . - 0 "transcript_id ""MSTRG.8245.6""; gene_id ""MSTRG.8245""; gene_name ""MSTRG.8245""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr7A_C_albicans_SC5314 MSCK_2020 exon 168926 169383 . - 0 "transcript_id ""MSTRG.8305.1""; gene_id ""MSTRG.8305""; gene_name ""MSTRG.8305""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr7A_C_albicans_SC5314 MSCK_2020 exon 184921 185252 . - 0 "transcript_id ""MSTRG.8309.1""; gene_id ""MSTRG.8309""; gene_name ""MSTRG.8309""; transcript_type ""novel""; gene_type ""novel"";" Ca22chr7A_C_albicans_SC5314 MSCK_2020 exon 770312 770576 . + 0 "transcript_id ""MSTRG.8537.1""; gene_id ""MSTRG.8537""; gene_name ""MSTRG.8537""; transcript_type ""novel""; gene_type ""novel"";" Ca22chrRA_C_albicans_SC5314 MSCK_2020 exon 7596 8350 . - 0 "transcript_id ""MSTRG.8766.2""; gene_id ""MSTRG.8766""; gene_name ""MSTRG.8766""; transcript_type ""novel""; gene_type ""novel"";" Ca22chrRA_C_albicans_SC5314 MSCK_2020 exon 8405 8527 . - 0 "transcript_id ""MSTRG.8766.2""; gene_id ""MSTRG.8766""; gene_name ""MSTRG.8766""; transcript_type ""novel""; gene_type ""novel"";" Ca22chrRA_C_albicans_SC5314 MSCK_2020 exon 7596 8193 . - 0 "transcript_id ""MSTRG.8766.3""; gene_id ""MSTRG.8766""; gene_name ""MSTRG.8766""; transcript_type ""novel""; gene_type ""novel"";" Ca22chrRA_C_albicans_SC5314 MSCK_2020 exon 8253 8350 . - 0 "transcript_id ""MSTRG.8766.3""; gene_id ""MSTRG.8766""; gene_name ""MSTRG.8766""; transcript_type ""novel""; gene_type ""novel"";" Ca22chrRA_C_albicans_SC5314 MSCK_2020 exon 8405 8490 . - 0 "transcript_id ""MSTRG.8766.3""; gene_id ""MSTRG.8766""; gene_name ""MSTRG.8766""; transcript_type ""novel""; gene_type ""novel"";" Ca22chrRA_C_albicans_SC5314 MSCK_2020 exon 7596 8350 . - 0 "transcript_id ""MSTRG.8766.4""; gene_id ""MSTRG.8766""; gene_name ""MSTRG.8766""; transcript_type ""novel""; gene_type ""novel"";" Ca22chrRA_C_albicans_SC5314 MSCK_2020 exon 8409 8490 . - 0 "transcript_id ""MSTRG.8766.4""; gene_id ""MSTRG.8766""; gene_name ""MSTRG.8766""; transcript_type ""novel""; gene_type ""novel"";" Ca22chrRA_C_albicans_SC5314 MSCK_2020 exon 204207 204425 . - 0 "transcript_id ""MSTRG.8853.1""; gene_id ""MSTRG.8853""; gene_name ""MSTRG.8853""; transcript_type ""novel""; gene_type ""novel"";" Ca22chrRA_C_albicans_SC5314 MSCK_2020 exon 1120679 1121024 . + 0 "transcript_id ""MSTRG.9256.1""; gene_id ""MSTRG.9256""; gene_name ""MSTRG.9256""; transcript_type ""novel""; gene_type ""novel"";" Ca22chrRA_C_albicans_SC5314 MSCK_2020 exon 1422279 1422819 . + 0 "transcript_id ""MSTRG.9377.6""; gene_id ""MSTRG.9377""; gene_name ""MSTRG.9377""; transcript_type ""novel""; gene_type ""novel"";" Ca22chrRA_C_albicans_SC5314 MSCK_2020 exon 1423423 1424261 . + 0 "transcript_id ""MSTRG.9377.6""; gene_id ""MSTRG.9377""; gene_name ""MSTRG.9377""; transcript_type ""novel""; gene_type ""novel"";" Ca22chrRA_C_albicans_SC5314 MSCK_2020 exon 1884764 1885311 . + 0 "transcript_id ""MSTRG.9573.1""; gene_id ""MSTRG.9573""; gene_name ""MSTRG.9573""; transcript_type ""novel""; gene_type ""novel"";" Ca22chrRA_C_albicans_SC5314 MSCK_2020 exon 2009420 2009590 . - 0 "transcript_id ""MSTRG.9605.2""; gene_id ""MSTRG.9605""; gene_name ""MSTRG.9605""; transcript_type ""novel""; gene_type ""novel"";" Ca22chrRA_C_albicans_SC5314 MSCK_2020 exon 2011900 2012657 . - 0 "transcript_id ""MSTRG.9605.2""; gene_id ""MSTRG.9605""; gene_name ""MSTRG.9605""; transcript_type ""novel""; gene_type ""novel"";" Ca22chrRA_C_albicans_SC5314 MSCK_2020 exon 1999057 1999493 . + 0 "transcript_id ""MSTRG.9626.1""; gene_id ""MSTRG.9626""; gene_name ""MSTRG.9626""; transcript_type ""novel""; gene_type ""novel"";" Ca22chrRA_C_albicans_SC5314 MSCK_2020 exon 2009551 2010652 . + 0 "transcript_id ""MSTRG.9632.1""; gene_id ""MSTRG.9632""; gene_name ""MSTRG.9632""; transcript_type ""novel""; gene_type ""novel"";" Ca22chrRA_C_albicans_SC5314 MSCK_2020 exon 2076202 2076927 . + 0 "transcript_id ""MSTRG.9666.1""; gene_id ""MSTRG.9666""; gene_name ""MSTRG.9666""; transcript_type ""novel""; gene_type ""novel"";" Ca22chrRA_C_albicans_SC5314 MSCK_2020 exon 2083265 2083724 . + 0 "transcript_id ""MSTRG.9668.1""; gene_id ""MSTRG.9668""; gene_name ""MSTRG.9668""; transcript_type ""novel""; gene_type ""novel"";" Ca22chrRA_C_albicans_SC5314 MSCK_2020 exon 2083278 2083394 . + 0 "transcript_id ""MSTRG.9668.2""; gene_id ""MSTRG.9668""; gene_name ""MSTRG.9668""; transcript_type ""novel""; gene_type ""novel"";" Ca22chrRA_C_albicans_SC5314 MSCK_2020 exon 2083523 2083725 . + 0 "transcript_id ""MSTRG.9668.2""; gene_id ""MSTRG.9668""; gene_name ""MSTRG.9668""; transcript_type ""novel""; gene_type ""novel"";" Ca22chrRA_C_albicans_SC5314 MSCK_2020 exon 2085614 2086251 . + 0 "transcript_id ""MSTRG.9669.1""; gene_id ""MSTRG.9669""; gene_name ""MSTRG.9669""; transcript_type ""novel""; gene_type ""novel"";" Ca22chrRA_C_albicans_SC5314 MSCK_2020 exon 2240255 2240628 . - 0 "transcript_id ""MSTRG.9734.1""; gene_id ""MSTRG.9734""; gene_name ""MSTRG.9734""; transcript_type ""novel""; gene_type ""novel"";" Ca22chrRB_C_albicans_SC5314 MSCK_2020 exon 611067 611540 . + 0 "transcript_id ""MSTRG.9895.1""; gene_id ""MSTRG.9895""; gene_name ""MSTRG.9895""; transcript_type ""novel""; gene_type ""novel"";" Ca22chrRB_C_albicans_SC5314 MSCK_2020 exon 624215 624446 . - 0 "transcript_id ""MSTRG.9904.1""; gene_id ""MSTRG.9904""; gene_name ""MSTRG.9904""; transcript_type ""novel""; gene_type ""novel"";" Ca22chrRB_C_albicans_SC5314 MSCK_2020 exon 1371132 1371340 . - 0 "transcript_id ""MSTRG.10192.1""; gene_id ""MSTRG.10192""; gene_name ""MSTRG.10192""; transcript_type ""novel""; gene_type ""novel"";"