Index of /download/homology

Icon  Name                    Last modified      Size  Description
[DIR] Parent Directory - [DIR] best_hits/ 22-Jul-2013 10:55 - [DIR] orthologs/ 22-Jul-2013 10:55 -

This directory contains data related to homology among Candida and
between Candida and other organisms.

The orthology subdirectory contains data pertaining to ortholog
mappings among Candida species in CGD, between Candida species
and S. cerevisiae, and between Candida species and S. pombe.

The best_hits subdirectory contains BLASTP-based mappings, which are
made with lower-stringency requirements compared to the ortholog
mappings.  If a protein lacks an ortholog in one of the other species,
we search to see if there is a best hit.

The specific procedures used for generation of these mappings is described here:
http://www.candidagenome.org/cgi-bin/reference/reference.pl?dbid=CAL0142012

For more details, please see the README documents in the
subdirectories.