| Reference | Literature Topic | Species | Genes Addressed |
|---|
Alkafeef SS, et al. (2020) Proteomic profiling of the monothiol glutaredoxin Grx3 reveals its global role in the regulation of iron dependent processes. PLoS Genet 16(6):e1008881
    | Large-scale protein interaction | C. albicans | |C1_07630W_A |GRX3 |HAP43 |SFU1 |
Alves R, et al. (2020) Transcriptional responses of Candida glabrata biofilm cells to fluconazole are modulated by the carbon source. NPJ Biofilms Microbiomes 6:4
| Genomic expression study | C. glabrata | |CAGL0F08239g |CAGL0J07980g |CAGL0K10274g |ERG11 |ERG9 |FTR1 |MGE1 |
Balachandra VK, et al. (2020) The RSC (Remodels the Structure of Chromatin) complex of Candida albicans shows compositional divergence with distinct roles in regulating pathogenic traits PLoS Genet
| Genomic expression study | C. albicans | |ARP7 |ARP9 |NPL6 |NRI1 |NRI2 |RSC2 |RSC4 |RSC58 |RSC8 |RSC9 |SFH1 |SNF12 |STH1 |
Caplan T, et al. (2020) Overcoming Fungal Echinocandin Resistance through Inhibition of the Non-essential Stress Kinase Yck2. Cell Chem Biol
| Large-scale phenotype analysis | C. albicans | |ALS3 |CHS1 |CHS2 |CHS3 |CHS8 |DDR48 |HRR25 |SOD5 |STP4 |URK1 |YCK2 |
Cheng R, et al. (2020) Characterization of the transcriptional response of Candida parapsilosis to the antifungal peptide MAF-1A PeerJ 8:e9767
| Genomic expression study | C. parapsilosis | |CPAR2_203780 |CPAR2_208190 |CPAR2_213060 |CPAR2_404910 |CPAR2_700300 |CPAR2_702930 |CPAR2_800950 |CPAR2_807700 |CPAR2_807710 |LIP2 |
Dawson CS, et al. (2020) Protein markers for Candida albicans EVs include claudin-like Sur7 family proteins. J Extracell Vesicles 9(1):1750810
| Large-scale protein localization | C. albicans | |ARF3 |BGL2 |BRO1 |C1_04200C_A |C2_08160C_A |C4_04800W_A |CAN1 |CAN2 |CDC42 |CDR1 |CDR2 |CHS3 |CRH11 |ECM33 |MORE |
Delarze E, et al. (2020) Identification and Characterization of Mediators of Fluconazole Tolerance in Candida albicans Front Microbiol 11:591140
| Genomic expression study, Large-scale phenotype analysis | C. albicans | |ASF1 |CKA1 |CPH1 |CRZ1 |CSC25 |CSK1 |ESP1 |GZF3 |KNS1 |KRE1 |LCB4 |MBF1 |PGA28 |PGA42 |MORE |
Doing G, et al. (2020) Conditional antagonism in co-cultures of Pseudomonas aeruginosa and Candida albicans: An intersection of ethanol and phosphate signaling distilled from dual-seq transcriptomics. PLoS Genet 16(8):e1008783
| Genomic expression study | C. albicans | |ADH1 |PHO4 |
Ev LD, et al. (2020) The role of Candida albicans in root caries biofilms: an RNA-seq analysis. J Appl Oral Sci 28:e20190578
| Genomic expression study | C. albicans | |ASR1 |C3_01020W_A |C7_03850W_A |GUT1 |HGT19 |ITR1 |STT4 |UTP20 |
Fan S, et al. (2020) Discovery of the Diploid Form of the Emerging Fungal Pathogen Candida auris ACS Infect Dis 6(10):2641-2646
| Genomic expression study | C. auris | |B9J08_000020 |B9J08_002513 |B9J08_004914 |
Feng J, et al. (2020) Hof1 plays a checkpoint related role in MMS induced DNA damage response in Candida albicans. Mol Biol Cell :mbcE19060316
| Large-scale phenotype analysis | C. albicans | |HOF1 |NOC2 |RAD23 |RAD4 |RAD53 |
Goncalves B, et al. (2020) Effect of progesterone on Candida albicans biofilm formation under acidic conditions: A transcriptomic analysis. Int J Med Microbiol :151414
| Genomic expression study | C. albicans | |ADH2 |AGP3 |AHR1 |ALS1 |ALS5 |ATO1 |ATP6 |ATP9 |BRG1 |C1_00160C_A |C1_01130W_A |C1_01630W_A |C1_07160C_A |C1_13130C_A |MORE |
Gong J, et al. (2020) The Als3 cell wall adhesin plays a critical role in human Serum amyloid A1 (SAA1)-induced cell death and aggregation in Candida albicans. Antimicrob Agents Chemother
| Genomic expression study | C. albicans | |AHR1 |ALS3 |BCR1 |EFG1 |
Jenull S, et al. (2020) ATAC-Seq Identifies Chromatin Landscapes Linked to the Regulation of Oxidative Stress in the Human Fungal Pathogen Candida albicans J Fungi (Basel) 6:E182
| Other genomic analysis | C. albicans | |CAP1 |
Khemiri I, et al. (2020) Transcriptome Analysis Uncovers a Link Between Copper Metabolism, and Both Fungal Fitness and Antifungal Sensitivity in the Opportunistic Yeast Candida albicans. Front Microbiol 11:935
| Genomic expression study | C. albicans | |ATX1 |CRP1 |CTR1 |CUP1 |FRE7 |MAC1 |
Komathy M, et al. (2020) LC-MS analysis reveals biological and metabolic processes essential for Candida albicans biofilm growth Microb Pathog
| Large-scale protein localization |
Kuloyo O, et al. (2020) Transcriptome Analyses of Candida albicans Biofilms, Exposed to Arachidonic Acid and Fluconazole, Indicates Potential Drug Targets G3 (Bethesda) 10:3099-3108
| Genomic expression study | C. albicans | |ADH1 |ALD6 |CAT1 |CSH1 |CYB5 |DBP3 |DBP7 |DRS1 |ERG1 |ERG11 |ERG3 |ERG9 |GCA1 |HPD1 |MORE |
Lagree K, et al. (2020) Roles of Candida albicans Mig1 and Mig2 in glucose repression, pathogenicity traits, and SNF1 essentiality. PLoS Genet 16(1):e1008582
| Genomic expression study | C. albicans | |CDC19 |CTN1 |ENO1 |FOX2 |GAL1 |GPM1 |HGT1 |HXK2 |ICL1 |MIG1 |MIG2 |MLS1 |PFK1 |PFK2 |MORE |
Marton T, et al. (2020) Use of CRISPR-Cas9 To Target Homologous Recombination Limits Transformation-Induced Genomic Changes in Candida albicans mSphere 5:e00620-20
| Large-scale phenotype analysis | C. albicans | |CDR3 |RPS1 |
Miramon P, et al. (2020) The paralogous transcription factors Stp1 and Stp2 of Candida albicans have distinct functions in nutrient acquisition and host interaction. Infect Immun
| Genomic expression study | C. albicans | |PTR3 |SFL2 |SSY1 |SSY5 |STP1 |STP2 |UME6 |
Oliver JC, et al. (2020) Metabolic profiling of Candida clinical isolates of different species and infection sources Sci Rep 10:16716
| Other large-scale proteomic analysis |
P?rn?nen P, et al. (2020) Isolation, characterization and regulation of moonlighting proteases from Candida glabrata cell wall Microb Pathog
| Large-scale protein detection | C. glabrata | |CAGL0D00176g |MET6 |PGI1 |PGK1 |TAL1 |
Pais P, et al. (2020) A new regulator in the crossroads of oxidative stress resistance and virulence in Candida glabrata: The transcription factor CgTog1 Virulence 11:1522-1538
| Genomic expression study | C. glabrata | |CAGL0A01606g |CAGL0B02079g |CAGL0D02640g |CAGL0E00649g |CAGL0F00649g |CAGL0F05709g |CAGL0G07931g |CAGL0H02491g |CAGL0I00116g |CAGL0K07942g |CAGL0M12001g |MIG1 |NCE103 |TOG1 |
Rasheed M, et al. (2020) Global Secretome Characterization of the Pathogenic Yeast Candida glabrata. J Proteome Res 19(1):49-63
| Large-scale protein localization | C. glabrata | |ACT1 |ADH1 |AHP1 |ATH1 |CAGL0A00979g |CAGL0A01474g |CAGL0A01540g |CAGL0A01870g |CAGL0A03117g |CAGL0A03278g |CAGL0B01100g |CAGL0C02453g |CAGL0C02475g |CAGL0C04389g |MORE |
Shahi G, et al. (2020) A detailed lipidomic study of human pathogenic fungi Candida auris FEMS Yeast Res 20:foaa045
| Other large-scale proteomic analysis |
Sitterle E, et al. (2020) Large-scale genome mining allows identification of neutral polymorphisms and novel resistance mutations in genes involved in Candida albicans resistance to azoles and echinocandins. J Antimicrob Chemother
| Other genomic analysis | C. albicans | |ERG11 |GSC1 |GSL1 |MRR1 |TAC1 |UPC2 |
Thakre A, et al. (2020) Oxidative stress induced by piperine leads to apoptosis in Candida albicans. Med Mycol
| Large-scale protein detection | C. albicans | |C1_01490W_A |C2_07070W_A |C6_04290W_A |CAT2 |CDC37 |FRS2 |GDH2 |GLO3 |MCA1 |MNT1 |PEX19 |PYC2 |RPN1 |SDH2 |MORE |
Thomas G, et al. (2020) Identifying Candida albicans Gene Networks Involved in Pathogenicity. Front Genet 11:375
| Computational analysis, Genomic expression study | C. albicans | |AHR1 |CST20 |GRR1 |HGC1 |HIT1 |HOG1 |HST7 |HWP1 |INT1 |PBS2 |PEP8 |RIM101 |RSR1 |SEF1 |MORE |
Truong T, et al. (2020) Proteomics Analysis of Candida albicans dnm1 Haploid Mutant Unraveled the Association Between Mitochondrial Fission and Antifungal Susceptibility. Proteomics :e1900240
| Large-scale protein detection, Genomic expression study | C. albicans | |DNM1 |
Verma R, et al. (2020) Genome-wide screening and in silico gene knockout to predict potential candidates for drug designing against Candida albicans. Infect Genet Evol :104196
| Computational analysis | C. albicans | |ERG5 |FAS2 |FOL1 |
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