| Reference | Literature Topic | Species | Genes Addressed |
|---|
Abdulghani M, et al. (2022) Proteomic profile of Candida albicans biofilm. J Proteomics 265:104661
  | Large-scale protein localization, Large-scale protein detection | C. albicans | |AGO1 |ALS10 |APR1 |ASR2 |ATP14 |ATP20 |C1_13270W_A |C2_03130W_A |C2_07290W_A |C3_01720C_A |C3_03410C_A |C3_04380C_A |C4_04800W_A |C5_04940W_A |MORE |
Askari F, et al. (2022) The yapsin family of aspartyl proteases regulate glucose homeostasis in Candida glabrata J Biol Chem
  | Large-scale protein localization | C. glabrata | |SNF3 |YPS1 |YPS10 |YPS11 |YPS2 |YPS3 |YPS4 |YPS5 |YPS6 |YPS7 |YPS8 |YPS9 |
Buakaew W, et al. (2022) Proteomic Analysis Reveals Proteins Involved in the Mode of Action of beta-Citronellol Identified From Citrus hystrix DC. Leaf Against Candida albicans. Front Microbiol 13:894637
| Large-scale protein detection | C. albicans | |ALS2 |ALS3 |ATP3 |ATP7 |COB |COX1 |CR_01020C_A |DDR48 |GST2 |PGA4 |RBT1 |SOD1 |
Bui LN, et al. (2022) Tup1 Paralog CgTUP11 Is a Stronger Repressor of Transcription than CgTUP1 in Candida glabrata. mSphere :e0076521
| Genomic expression study | C. albicans | |TUP1 |
| | C. glabrata | |HBN1 |TUP1 |TUP11 |YPS2 |YPS4 |
Chan W, et al. (2022) Induction of amphotericin B resistance in susceptible Candida auris by extracellular vesicles. Emerg Microbes Infect :1-40
| Large-scale protein localization | C. albicans | |MP65 |XOG1 |
Fahim A, et al. (2022) Efficacy of bakuchiol-garlic combination against virulent genes of Candida albicans. PeerJ 9:e12251
| Genomic expression study | C. albicans | |ALS1 |ALS3 |HWP1 |SAP5 |
Gaspar-Cordeiro A, et al. (2022) Copper Acts Synergistically With Fluconazole in Candida glabrata by Compromising Drug Efflux, Sterol Metabolism, and Zinc Homeostasis. Front Microbiol 13:920574
| Genomic expression study | C. glabrata | |CDR1 |PDR1 |ZAP1 |
Helmstetter N, et al. (2022) Population genetics and microevolution of clinical Candida glabrata reveals recombinant sequence types and hyper-variation within mitochondrial genomes, virulence genes and drug-targets. Genetics
| Other genomic analysis | C. glabrata | |CAGL0B00242g |ERG4 |FKS1 |MATalpha1 |
Henry M, et al. (2022) Transcriptional Control of Hypoxic Hyphal Growth in the Fungal Pathogen Candida albicans Front Cell Infect Microbiol 11:770478
| Genomic expression study | C. albicans | |AHR1 |ALK8 |ARV1 |ATP1 |ATP14 |ATP18 |ATP19 |ATP2 |ATP5 |ATP7 |C1_04180W_A |CYB5 |CYR1 |DAG7 |MORE |
Lee Y, et al. (2022) Functional analysis of the Candida albicans kinome reveals Hrr25 as a regulator of antifungal susceptibility. iScience 25(6):104432
| Large-scale phenotype analysis | C. albicans | |HRR25 |
Lemberg C, et al. (2022) Candida albicans commensalism in the oral mucosa is favoured by limited virulence and metabolic adaptation. PLoS Pathog 18(4):e1010012
| Genomic expression study | C. albicans | |ECE1 |NRG1 |
Pais P, et al. (2022) Prediction of Gene and Genomic Regulation in Candida Species, Using the PathoYeastract Database: A Comparative Genomics Approach. Methods Mol Biol 2477:419-437
| Computational analysis | C. glabrata | |QDR2 |RPN4 |
Qadri H, et al. (2022) Quinidine Drug Resistance transporter Knockout Candida cells modulate glucose transporter expression and accumulate metabolites leading to enhanced azole drug resistance. Fungal Genet Biol :103713
| Genomic expression study | C. albicans | |HGT8 |HGT9 |QDR1 |QDR2 |QDR3 |
Rashid S, et al. (2022) SAGA Complex Subunits in Candida albicans Differentially Regulate Filamentation, Invasiveness, and Biofilm Formation. Front Cell Infect Microbiol 12:764711
| Genomic expression study | C. albicans | |GCN5 |NGG1 |SPT7 |SPT8 |TRA1 |UBP8 |
Salazar SB, et al. (2022) Disclosing azole resistance mechanisms in resistant C. glabrata strains encoding wild-type or gain-of-function CgPDR1 alleles through comparative genomics and transcriptomics. G3 (Bethesda)
| Genomic expression study | C. glabrata | |ADH1 |AED1 |AQY1 |AUS1 |AWP2 |AWP6 |CAGL0A01221g |CAGL0A02299g |CAGL0E06424g |CAGL0F05137g |CAGL0H00847g |CAGL0H07469g |CAGL0J01661g |CAGL0K01353g |MORE |
Schrevens S, et al. (2022) Using in vivo transcriptomics and RNA enrichment to identify genes involved in virulence of Candida glabrata. Virulence
| Genomic expression study | C. glabrata | |ATH1 |AUS1 |CAGL0C00253g |CAGL0C01133g |CAGL0D03784g |CAGL0I11011g |CNA1 |DUR1,2 |GAP1 |MLS1 |SKN7 |
Song Y, et al. (2022) 2-Alkyl-anthraquinones inhibit Candida albicans biofilm via inhibiting the formation of matrix and hyphae. Res Microbiol :103955
| Genomic expression study | C. albicans | |ECE1 |EFG1 |HWP1 |IFD6 |PMT6 |
Tao L, et al. (2022) Streptococcus mutans suppresses filamentous growth of Candida albicans through secreting mutanocyclin, an unacylated tetramic acid. Virulence 13(1):542-557
| Genomic expression study | C. albicans | |HYR4 |IFF8 |SFL1 |SPR1 |TPK2 |
Wakade RS, et al. (2022) Candida albicans Filamentation Does Not Require the cAMP-PKA Pathway In Vivo. MBio :e0085122
| Genomic expression study | C. albicans | |CYR1 |EFG1 |NRG1 |TPK1 |TPK2 |
Zeng Y, et al. (2022) Lactobacillus plantarum Disrupts S. mutans-C. albicans Cross-Kingdom Biofilms. Front Cell Infect Microbiol 12:872012
| Genomic expression study | C. albicans | |CAT1 |CHT2 |CTN1 |ERG4 |
Zhu B, et al. (2022) Synergistic Antibiofilm Effects of Pseudolaric Acid A Combined with Fluconazole against Candida albicans via Inhibition of Adhesion and Yeast-To-Hypha Transition. Microbiol Spectr :e0147821
| Genomic expression study | C. albicans | |ALS1 |ALS2 |ALS3 |ALS4 |ECE1 |PRA1 |TEC1 |
Alqahtani FM, et al. (2021) Combining Genome-Wide Gene Expression Analysis (RNA-seq) and a Gene Editing Platform (CRISPR-Cas9) to Uncover the Selectively Pro-oxidant Activity of Aurone Compounds Against Candida albicans Front Microbiol 12:708267
| Genomic expression study | C. albicans | |TYE7 |
Beekman CN, et al. (2021) Comparative genomics of white and opaque cell states supports an epigenetic mechanism of phenotypic switching in Candida albicans G3 (Bethesda) 11:jkab001
| Genomic expression study |
Bliss JM, et al. (2021) Transcription Profiles Associated with Inducible Adhesion in Candida parapsilosis mSphere 6:e01071-20
| Genomic expression study | C. parapsilosis | |CPAR2_200650 |CPAR2_400510 |CPAR2_701230 |PHR1 |
Ceballos-Garzon A, et al. (2021) Genotypic, proteomic, and phenotypic approaches to decipher the response to caspofungin and calcineurin inhibitors in clinical isolates of echinocandin-resistant Candida glabrata J Antimicrob Chemother
| Large-scale phenotype analysis | C. glabrata | |CAGL0A04257g |CAGL0B03795g |CAGL0C01683g |CAGL0F04631g |CAGL0F04895g |CAGL0I05060g |CAGL0J05566g |CAGL0J08591g |CAGL0J09724g |CAGL0J11440g |CAGL0K00605g |CAGL0K04169g |CAGL0L06182g |CAGL0L10021g |MORE |
Chew SY, et al. (2021) Transcriptomic and proteomic profiling revealed reprogramming of carbon metabolism in acetate-grown human pathogen Candida glabrata J Biomed Sci 28:1
| Genomic expression study | C. glabrata | |AAT1 |ACO1 |ADH2 |CAGL0H05137g |CAGL0J00451g |CIT1 |CTA1 |ENO1 |FBP1 |GCV1 |GPM1 |HXK2 |ICL1 |IDP2 |MORE |
Delaveau T, et al. (2021) Yap5 Competes With Hap4 for the Regulation of Iron Homeostasis Genes in the Human Pathogen Candida glabrata Front Cell Infect Microbiol 11:731988
| Genomic co-immunoprecipitation study | C. glabrata | |AP5 |CCC1 |GLT1 |GRX4 |HAP4 |HAP5 |ISA1 |
Fourie R, et al. (2021) Transcriptional response of Candida albicans to Pseudomonas aeruginosa in a polymicrobial biofilm G3 (Bethesda)
| Genomic expression study | C. albicans | |ADH2 |ADH3 |ADH5 |C2_04480W_A |CAT1 |CSA1 |CTA4 |ECE1 |FDH3 |GAL4 |HWP1 |HYR1 |RBT1 |RBT4 |MORE |
Goncalves B, et al. (2021) Revealing Candida glabrata biofilm matrix proteome: global characterization and pH response Biochem J
| Large-scale protein localization | C. glabrata | |ACT1 |AED1 |AHP1 |ALD4 |ARG1 |ARO8 |ASC1 |ATH1 |ATP1 |ATP2 |AWP12 |AWP3 |AWP6 |BMH1(B) |MORE |
Guinea J, et al. (2021) Whole genome sequencing confirms Candida albicans and Candida parapsilosis microsatellite sporadic and persistent clones causing outbreaks of candidemia in neonates Med Mycol
| Other genomic analysis |
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