| Reference | Literature Topic | Species | Genes Addressed |
|---|
Abdulghani M, et al. (2022) Proteomic profile of Candida albicans biofilm. J Proteomics 265:104661
  | Large-scale protein localization, Large-scale protein detection | C. albicans | |AGO1 |ALS10 |APR1 |ASR2 |ATP14 |ATP20 |C1_13270W_A |C2_03130W_A |C2_07290W_A |C3_01720C_A |C3_03410C_A |C3_04380C_A |C4_04800W_A |C5_04940W_A |MORE |
Al-Madboly LA, et al. (2022) Novel Preclinical Study of Galloylquinic Acid Compounds from Copaifera lucens with Potent Antifungal Activity against Vaginal Candidiasis Induced in a Murine Model via Multitarget Modes of Action. Microbiol Spectr :e0272421
| Genomic expression study | C. albicans | |ALS1 |HWP1 |LIP1 |PLB1 |SAP1 |
Andrawes N, et al. (2022) Regulation of heme utilization and homeostasis in Candida albicans. PLoS Genet 18(9):e1010390
| Genomic expression study, Large-scale phenotype analysis | C. albicans | |C1_05970W_A |C1_11410C_A |C3_04600C_A |C4_06240W_A |CAT1 |CPD2 |CR_06690C_A |CSA1 |CSU57 |DFG16 |DUR4 |FLC2 |FRP1 |FRP2 |MORE |
Askari F, et al. (2022) The yapsin family of aspartyl proteases regulate glucose homeostasis in Candida glabrata J Biol Chem
  | Large-scale protein localization | C. glabrata | |SNF3 |YPS1 |YPS10 |YPS11 |YPS2 |YPS3 |YPS4 |YPS5 |YPS6 |YPS7 |YPS8 |YPS9 |
Bataineh MTA, et al. (2022) Exploring the effect of estrogen on Candida albicans hyphal cell wall glycans and ergosterol synthesis. Front Cell Infect Microbiol 12:977157
| Genomic expression study | C. albicans | |ALS3 |ECE1 |GCV2 |HGT20 |HWP1 |IHD1 |MEP1 |SOD5 |
Bottcher B, et al. (2022) Impaired amino acid uptake leads to global metabolic imbalance of Candida albicans biofilms. NPJ Biofilms Microbiomes 8(1):78
| Large-scale protein localization, Genomic expression study | C. albicans | |STP2 |
Buakaew W, et al. (2022) Proteomic Analysis Reveals Proteins Involved in the Mode of Action of beta-Citronellol Identified From Citrus hystrix DC. Leaf Against Candida albicans. Front Microbiol 13:894637
| Large-scale protein detection | C. albicans | |ALS2 |ALS3 |ATP3 |ATP7 |COB |COX1 |CR_01020C_A |DDR48 |GST2 |PGA4 |RBT1 |SOD1 |
Bui LN, et al. (2022) Tup1 Paralog CgTUP11 Is a Stronger Repressor of Transcription than CgTUP1 in Candida glabrata. mSphere :e0076521
| Genomic expression study | C. glabrata | |HBN1 |TUP1 |TUP11 |YPS2 |YPS4 |
| | C. albicans | |TUP1 |
Chan W, et al. (2022) Induction of amphotericin B resistance in susceptible Candida auris by extracellular vesicles. Emerg Microbes Infect :1-40
| Large-scale protein localization | C. albicans | |MP65 |XOG1 |
Dekkerova J, et al. (2022) Farnesol Boosts the Antifungal Effect of Fluconazole and Modulates Resistance in Candida auris through Regulation of the CDR1 and ERG11 Genes. J Fungi (Basel) 8(8)
| Genomic expression study | C. auris | |ERG11 |
Do E, et al. (2022) Collaboration between Antagonistic Cell Type Regulators Governs Natural Variation in the Candida albicans Biofilm and Hyphal Gene Expression Network. MBio :e0193722
| Genomic expression study | C. albicans | |BRG1 |EFG1 |TEC1 |WOR1 |
Fahim A, et al. (2022) Efficacy of bakuchiol-garlic combination against virulent genes of Candida albicans. PeerJ 9:e12251
| Genomic expression study | C. albicans | |ALS1 |ALS3 |HWP1 |SAP5 |
Feng Y, et al. (2022) Transcriptional Profiling of the Candida albicans Response to the DNA Damage Agent Methyl Methanesulfonate. Int J Mol Sci 23(14)
| Genomic expression study | C. albicans | |C2_08420W_A |C4_07010C_A |CAP1 |COX17 |CR_01020C_A |DDR48 |GST2 |GST3 |PRI2 |RAD53 |RAD7 |SRV2 |
Gaspar-Cordeiro A, et al. (2022) Copper Acts Synergistically With Fluconazole in Candida glabrata by Compromising Drug Efflux, Sterol Metabolism, and Zinc Homeostasis. Front Microbiol 13:920574
| Genomic expression study | C. glabrata | |CDR1 |PDR1 |ZAP1 |
Helmstetter N, et al. (2022) Population genetics and microevolution of clinical Candida glabrata reveals recombinant sequence types and hyper-variation within mitochondrial genomes, virulence genes and drug-targets. Genetics
| Other genomic analysis | C. glabrata | |CAGL0B00242g |ERG4 |FKS1 |MATalpha1 |
Henry M, et al. (2022) Transcriptional Control of Hypoxic Hyphal Growth in the Fungal Pathogen Candida albicans Front Cell Infect Microbiol 11:770478
| Genomic expression study | C. albicans | |AHR1 |ALK8 |ARV1 |ATP1 |ATP14 |ATP18 |ATP19 |ATP2 |ATP5 |ATP7 |C1_04180W_A |CYB5 |CYR1 |DAG7 |MORE |
Jenull S, et al. (2022) Transcriptomics and Phenotyping Define Genetic Signatures Associated with Echinocandin Resistance in Candida auris. MBio :e0079922
| Genomic expression study | C. auris | |FKS1 |
Lee Y, et al. (2022) Functional analysis of the Candida albicans kinome reveals Hrr25 as a regulator of antifungal susceptibility. iScience 25(6):104432
| Large-scale phenotype analysis | C. albicans | |HRR25 |
Lemberg C, et al. (2022) Candida albicans commensalism in the oral mucosa is favoured by limited virulence and metabolic adaptation. PLoS Pathog 18(4):e1010012
| Genomic expression study | C. albicans | |ECE1 |NRG1 |
Lv QZ, et al. (2022) iTRAQ-based proteomics revealed baicalein enhanced oxidative stress of Candida albicans by up-regulating CPD2 expression. Med Mycol
| Large-scale protein detection | C. albicans | |CPD2 |ERG10 |ERG11 |ERG25 |ERG3 |ERG5 |ERG6 |NCP1 |SNQ2 |
Pais P, et al. (2022) Prediction of Gene and Genomic Regulation in Candida Species, Using the PathoYeastract Database: A Comparative Genomics Approach. Methods Mol Biol 2477:419-437
| Computational analysis | C. glabrata | |QDR2 |RPN4 |
Qadri H, et al. (2022) Quinidine Drug Resistance transporter Knockout Candida cells modulate glucose transporter expression and accumulate metabolites leading to enhanced azole drug resistance. Fungal Genet Biol :103713
| Genomic expression study | C. albicans | |HGT8 |HGT9 |QDR1 |QDR2 |QDR3 |
Rashid S, et al. (2022) SAGA Complex Subunits in Candida albicans Differentially Regulate Filamentation, Invasiveness, and Biofilm Formation. Front Cell Infect Microbiol 12:764711
| Genomic expression study | C. albicans | |GCN5 |NGG1 |SPT7 |SPT8 |TRA1 |UBP8 |
Salazar SB, et al. (2022) Disclosing azole resistance mechanisms in resistant C. glabrata strains encoding wild-type or gain-of-function CgPDR1 alleles through comparative genomics and transcriptomics. G3 (Bethesda)
| Genomic expression study | C. glabrata | |ADH1 |AED1 |AQY1 |AUS1 |AWP2 |AWP6 |CAGL0A01221g |CAGL0A02299g |CAGL0E06424g |CAGL0F05137g |CAGL0H00847g |CAGL0H07469g |CAGL0J01661g |CAGL0K01353g |MORE |
Schrevens S, et al. (2022) Using in vivo transcriptomics and RNA enrichment to identify genes involved in virulence of Candida glabrata. Virulence
| Genomic expression study | C. glabrata | |ATH1 |AUS1 |CAGL0C00253g |CAGL0C01133g |CAGL0D03784g |CAGL0I11011g |CNA1 |DUR1,2 |GAP1 |MLS1 |SKN7 |
Song Y, et al. (2022) 2-Alkyl-anthraquinones inhibit Candida albicans biofilm via inhibiting the formation of matrix and hyphae. Res Microbiol :103955
| Genomic expression study | C. albicans | |ECE1 |EFG1 |HWP1 |IFD6 |PMT6 |
Spruijtenburg B, et al. (2022) Confirmation of fifth Candida auris clade by whole genome sequencing. Emerg Microbes Infect :1-15
| Other genomic analysis | C. auris | |ERG11 |TAC1b |
Sriram K (2022) A mathematical model captures the role of adenyl cyclase Cyr1 and guanidine exchange factor Ira2 in creating a growth-to-hyphal bistable switch in Candida albicans. FEBS Open Bio
| Computational analysis | C. albicans | |CYR1 |IRA2 |
Tao L, et al. (2022) Streptococcus mutans suppresses filamentous growth of Candida albicans through secreting mutanocyclin, an unacylated tetramic acid. Virulence 13(1):542-557
| Genomic expression study | C. albicans | |HYR4 |IFF8 |SFL1 |SPR1 |TPK2 |
Wakade RS, et al. (2022) Candida albicans Filamentation Does Not Require the cAMP-PKA Pathway In Vivo. MBio :e0085122
| Genomic expression study | C. albicans | |CYR1 |EFG1 |NRG1 |TPK1 |TPK2 |
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