| Reference | Literature Topic | Species | Genes Addressed |
|---|
Allert S, et al. (2018) Candida albicans-Induced Epithelial Damage Mediates Translocation through Intestinal Barriers. MBio 9(3)
    | Large-scale phenotype analysis | C. albicans | |AAF1 |ALS3 |BAS1 |C1_01490W_A |C1_07480C_A |CPH1 |DEF1 |ECE1 |HGC1 |HMA1 |KEX1 |NPR2 |PEP12 |SAP1 |MORE |
Awad A, et al. (2018) Proteomic analysis of a Candida albicans pga1 Null Strain. EuPA Open Proteom 18:1-6
| Large-scale protein detection | C. albicans | |APE2 |CDC11 |CDR1 |CDR2 |CFL1 |CR_03530W_A |EGD2 |ERG1 |ERG11 |EXG2 |HSP70 |HSP90 |INT1 |LIP10 |MORE |
Awad A, et al. (2018) Tandem Mass Spectrometric Cell Wall Proteome Profiling of a Candida albicans hwp2 Mutant Strain. Curr Mol Pharmacol 11(3):211-225
| Large-scale protein detection | C. albicans | |CHT2 |HWP2 |MTS1 |PGA28 |PGA32 |PGA41 |PGA50 |PHR1 |RBR1 |SAP10 |SAP4 |SAP5 |
Caplan T, et al. (2018) Functional Genomic Screening Reveals Core Modulators of Echinocandin Stress Responses in Candida albicans. Cell Rep 23(8):2292-2298
| Large-scale phenotype analysis | C. albicans | |AHR1 |BCK1 |C6_00530C_A |CAS5 |CAT1 |CCT8 |DBP8 |GSC1 |GSL1 |HSP90 |KEX2 |MKC1 |NOP14 |PKC1 |MORE |
Chen Y, et al. (2018) Chemogenomic Profiling of the Fungal Pathogen Candida albicans. Antimicrob Agents Chemother 62(2)
| Large-scale phenotype analysis | C. albicans | |ADP1 |AGM1 |ALO1 |C1_07050C_A |C1_10320W_A |C1_14500C_A |C2_05290C_A |C3_03110W_A |C4_00470C_A |C4_04870C_A |C5_00560W_A |C6_00430C_A |C6_02410W_A |CHS7 |MORE |
El Khoury P, et al. (2018) Proteomic analysis of a Candida albicans pir32 null strain reveals proteins involved in adhesion, filamentation and virulence. PLoS One 13(3):e0194403
| Large-scale protein detection | C. albicans | |ALS3 |CDC42 |CSA2 |DCW1 |DFG5 |PIR32 |RBT5 |SSR1 |SSU81 |UCF1 |XOG1 |
Forche A, et al. (2018) Rapid Phenotypic and Genotypic Diversification After Exposure to the Oral Host Niche in Candida albicans. Genetics 209(3):725-741
| Other genomic analysis | C. albicans | |GAL1 |
Herrero-de-Dios C, et al. (2018) Redox Regulation, Rather than Stress-Induced Phosphorylation, of a Hog1 Mitogen-Activated Protein Kinase Modulates Its Nitrosative-Stress-Specific Outputs. MBio 9(2)
| Genomic expression study | C. albicans | |HOG1 |
Huang M and Kao KC (2018) Identifying novel genetic determinants for oxidative stress tolerance in Candida glabrata via adaptive laboratory evolution. Yeast 35(11):605-618
| Large-scale phenotype analysis | C. glabrata | |CAGL0C00385g |CAGL0F06831g |CTH2 |
Jiang L, et al. (2018) CaGdt1 plays a compensatory role for the calcium pump CaPmr1 in the regulation of calcium signaling and cell wall integrity signaling in Candida albicans. Cell Commun Signal 16(1):33
| Genomic expression study | C. albicans | |C5_05020C_A |CEK1 |CHS2 |CHS3 |CHS8 |DIE2 |GDT1 |MKC1 |PMR1 |PMT1 |PMT4 |STT3 |SWI4 |
Kaneva IN, et al. (2018) Quantitative Proteomic Analysis in Candida albicans Using SILAC-Based Mass Spectrometry. Proteomics 18(5-6):e1700278
| Large-scale protein detection | C. albicans | |ARG4 |CDC14 |
Lee JH, et al. (2018) Antibiofilm and Antivirulence Activities of 6-Gingerol and 6-Shogaol Against Candida albicans Due to Hyphal Inhibition. Front Cell Infect Microbiol 8:299
| Genomic expression study | C. albicans | |CDR1 |CDR2 |ECE1 |HWP1 |RTA3 |
McCall AD, et al. (2018) Candida albicans Sfl1/Sfl2 regulatory network drives the formation of pathogenic microcolonies. PLoS Pathog 14(9):e1007316
| Genomic expression study | C. albicans | |ECE1 |HWP1 |HYR1 |IHD1 |NDT80 |PGA10 |PLB1 |ROB1 |SAP5 |SFL1 |SFL2 |
Mount HO, et al. (2018) Global analysis of genetic circuitry and adaptive mechanisms enabling resistance to the azole antifungal drugs. PLoS Genet 14(4):e1007319
| Large-scale genetic interaction, Large-scale phenotype analysis | C. albicans | |APM1 |CR_03430W_A |ERG3 |ERG5 |GZF3 |KIC1 |MRR2 |NPR2 |PBS2 |PEP8 |RCY1 |RGD1 |SET6 |SSK2 |MORE |
Nair R, et al. (2018) Identification of genome-wide binding sites of heat shock factor 1, Hsf1, under basal conditions in the human pathogenic yeast, Candida albicans. AMB Express 8(1):116
| Genomic co-immunoprecipitation study | C. albicans | |CTA8 |
O'Meara TR, et al. (2018) High-Throughput Screening Identifies Genes Required for Candida albicans Induction of Macrophage Pyroptosis. MBio 9(4)
| Large-scale phenotype analysis | C. albicans | |HOG1 |MNN2 |MNN21 |MNN22 |MNN23 |MNN24 |MNN26 |PGA52 |
Schoeters F, et al. (2018) A High-Throughput Candida albicans Two-Hybrid System. mSphere 3(4)
| Large-scale protein interaction | C. albicans | |PCL5 |PHO85 |
Segal ES, et al. (2018) Gene Essentiality Analyzed by In Vivo Transposon Mutagenesis and Machine Learning in a Stable Haploid Isolate of Candida albicans. MBio 9(5)
| Large-scale phenotype analysis | C. albicans | |ASK1 |C1_12660W_A |C1_12810W_A |C2_06230W_A |C6_04120C_A |C7_02460C_A |CDC11 |CDC12 |CDC3 |CLN3 |CR_03740C_A |CR_05100W_A |FAD1 |KRR1 |MORE |
Thakre A, et al. (2018) Limonene inhibits Candida albicans growth by inducing apoptosis. Med Mycol 56(5):565-578
| Large-scale protein detection | C. albicans | |C6_02480W_A |CCT8 |CRN1 |CR_04650W_A |EBP1 |KRE6 |MBF1 |NPL3 |PIL1 |PIN3 |RHR2 |RPL11 |RPL15A |RPL29 |MORE |
Tripathi H and Khan F (2018) Identification of potential inhibitors against nuclear Dam1 complex subunit Ask1 of Candida albicans using virtual screening and MD simulations. Comput Biol Chem 72:33-44
| Computational analysis | C. albicans | |ASK1 |DAM1 |
Tucey TM, et al. (2018) Glucose Homeostasis Is Important for Immune Cell Viability during Candida Challenge and Host Survival of Systemic Fungal Infection. Cell Metab 27(5):988-1006.e7
| Genomic expression study | C. albicans | |GAL4 |TYE7 |
Turner SA, et al. (2018) Dal81 Regulates Expression of Arginine Metabolism Genes in Candida parapsilosis. mSphere 3(2)
| Genomic expression study | C. parapsilosis | |DAL81 |GAT1 |GCN4 |GZF3 |PUT3 |UGA3 |
Uppuluri P, et al. (2018) Candida albicans Dispersed Cells Are Developmentally Distinct from Biofilm and Planktonic Cells. MBio 9(4)
| Genomic expression study | C. albicans | |ACE2 |ARO2 |ARO3 |ARO4 |ARO8 |ARO9 |ASC1 |CDC5 |CHA1 |CHS1 |CHS2 |CHS8 |CHT1 |CHT2 |MORE |
Veri AO, et al. (2018) Tuning Hsf1 levels drives distinct fungal morphogenetic programs with depletion impairing Hsp90 function and overexpression expanding the target space. PLoS Genet 14(3):e1007270
| Genomic expression study | C. albicans | |ACT1 |AHA1 |BRG1 |BUB2 |C5_05270C_A |CDC37 |CPR6 |CTA8 |EFG1 |HCH1 |HSP90 |KEX2 |NOP1 |RAS1 |MORE |
Yu SJ, et al. (2018) Deletion of ADA2 Increases Antifungal Drug Susceptibility and Virulence in Candida glabrata. Antimicrob Agents Chemother 62(3)
| Genomic expression study | C. glabrata | |ADA2 |CAGL0G05269g |CAGL0L01771g |EPA20 |EPA23 |ERG6 |GAS3 |GCN5 |YPS10 |YPS4 |
Znaidi S, et al. (2018) Systematic gene overexpression in Candida albicans identifies a regulator of early adaptation to the mammalian gut. Cell Microbiol 20(11):e12890
| Large-scale phenotype analysis | C. albicans | |CRZ2 |
Azadmanesh J, et al. (2017) Filamentation Involves Two Overlapping, but Distinct, Programs of Filamentation in the Pathogenic Fungus Candida albicans. G3 (Bethesda) 7(11):3797-3808
| Genomic expression study, Large-scale phenotype analysis | C. albicans | |C1_04630C_A |C4_00610W_A |C4_04090C_A |C6_02740W_A |COX4 |CR_03430W_A |GPA2 |IRE1 |KEX2 |KRE5 |PEP8 |PHR1 |RFG1 |RIM101 |MORE |
Basso V, et al. (2017) The two-component response regulator Skn7 belongs to a network of transcription factors regulating morphogenesis in Candida albicans and independently limits morphogenesis-induced ROS accumulation. Mol Microbiol 106(1):157-182
| Genomic expression study | C. albicans | |CPH1 |EFG1 |SKN7 |UME6 |
Bernardo RT, et al. (2017) The CgHaa1-Regulon Mediates Response and Tolerance to Acetic Acid Stress in the Human Pathogen Candida glabrata. G3 (Bethesda) 7(1):1-18
| Genomic expression study | C. glabrata | |CAGL0E03740g |CAGL0G05632g |FPS1 |FPS2 |HAA1 |PMA1 |RSB1 |SSA3 |TPO3 |YPS4 |
Biswas C, et al. (2017) Whole Genome Sequencing of Candida glabrata for Detection of Markers of Antifungal Drug Resistance. J Vis Exp (130)
| Other genomic analysis | C. glabrata | |CDR1 |FCY2 |FKS1 |FKS2 |PDR1 |
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